[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 848 items for (author: you & ll)

EMDB-19406:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

EMDB-19407:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

PDB-8rox:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

PDB-8roy:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

EMDB-17375:
Neisseria meningitidis Type IV pilus SB-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17384:
Neisseria meningitidis Type IV pilus SB-DATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17386:
Neisseria meningitidis Type IV pilus SA-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17683:
Neisseria meningitidis Type IV pilus SB-GATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17695:
Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17718:
Neisseria meningitidis PilE, SB-GATDH variant, bound to the F10 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8p2v:
Neisseria meningitidis Type IV pilus SB-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8p36:
Neisseria meningitidis Type IV pilus SB-DATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8p3b:
Neisseria meningitidis Type IV pilus SA-GATDH variant
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8pij:
Neisseria meningitidis Type IV pilus SB-GATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8piz:
Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

PDB-8pjp:
Neisseria meningitidis PilE, SB-GATDH variant, bound to the F10 nanobody
Method: helical / : Fernandez-Martinez D, Dumenil G

EMDB-17218:
Lipidic amyloid-beta(1-40) fibril - polymorph L1
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

EMDB-17223:
Lipidic amyloid-beta(1-40) fibril - polymorph L2
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

EMDB-17234:
Lipidic amyloid-beta(1-40) fibril - polymorph L3
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

EMDB-17235:
Lipidic amyloid-beta(1-40) fibril - polymorph L2-L3
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

EMDB-17238:
Lipidic amyloid-beta(1-40) fibril - polymorph L2-L2
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

EMDB-17239:
Lipidic amyloid-beta(1-40) fibril - polymorph L3-L3
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

PDB-8ovk:
Lipidic amyloid-beta(1-40) fibril - polymorph L1
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

PDB-8ovm:
Lipidic amyloid-beta(1-40) fibril - polymorph L2
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

PDB-8owd:
Lipidic amyloid-beta(1-40) fibril - polymorph L3
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

PDB-8owe:
Lipidic amyloid-beta(1-40) fibril - polymorph L2-L3
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

PDB-8owj:
Lipidic amyloid-beta(1-40) fibril - polymorph L2-L2
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

PDB-8owk:
Lipidic amyloid-beta(1-40) fibril - polymorph L3-L3
Method: helical / : Frieg B, Han M, Giller K, Dienemann C, Riedel D, Becker S, Andreas LB, Griesinger C, Schroeder GF

EMDB-40853:
CH505 Disulfide Stapled SOSIP Bound to b12 Fab
Method: single particle / : Henderson R

EMDB-40854:
CH505 Disulfide Stapled SOSIP Bound to CH235.12 Fab
Method: single particle / : Henderson R

PDB-8sxi:
CH505 Disulfide Stapled SOSIP Bound to b12 Fab
Method: single particle / : Henderson R

PDB-8sxj:
CH505 Disulfide Stapled SOSIP Bound to CH235.12 Fab
Method: single particle / : Henderson R

EMDB-28752:
Cryo-electron tomography of wild type a-synuclein preformed fibrils
Method: electron tomography / : Jiang J, Boparai N, Dai W, Kim YS

EMDB-28753:
Cryo-electron tomography of S42Y a-synuclein preformed fibrils
Method: electron tomography / : Jiang J, Boparai N, Dai W, Kim YS

PDB-8phe:
ACAD9-WT in complex with ECSIT-CTER
Method: single particle / : McGregor L, Acajjaoui S, Desfosses A, Saidi M, Bacia-Verloop M, Schwarz JJ, Juyoux P, Von Velsen J, Bowler MW, McCarthy A, Kandiah E, Gutsche I, Soler-Lopez M

PDB-8phf:
Cryo-EM structure of human ACAD9-S191A
Method: single particle / : McGregor L, Acajjaoui S, Desfosses A, Saidi M, Bacia-Verloop M, Schwarz JJ, Juyoux P, Von Velsen J, Bowler MW, McCarthy A, Kandiah E, Gutsche I, Soler-Lopez M

EMDB-36229:
CryoEM structure of Gi-coupled MRGPRX1 with peptide agonist CNF-Tx2
Method: single particle / : Sun JP, Xu HE, Yang F, Liu ZM, Guo LL, Zhang YM, Fang GX, Tie L, Zhuang YM, Xue CY

EMDB-36232:
CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Sun JP, Xu HE, Yang F, Liu ZM, Guo LL, Zhang YM, Fang GX, Tie L, Zhuang YM, Xue CY

EMDB-36233:
CryoEM structure of Gi-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Sun JP, Xu HE, Yang F, Liu ZM, Guo LL, Zhang YM, Fang GX, Tie L, Zhuang YM, Xue CY

EMDB-34022:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

PDB-7yq8:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

EMDB-42481:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5
Method: single particle / : Park YJ, Veesler D

EMDB-42482:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5 (local refinement of TH-1heptad)
Method: single particle / : Park YJ, Veesler D

EMDB-42483:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-2heptad-I53_dn5
Method: single particle / : Park YJ, Veesler D

EMDB-42485:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5
Method: single particle / : Park YJ, Veesler D

EMDB-42486:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5 (local refinement of TH-6heptad)
Method: single particle / : Park YJ, Veesler D

PDB-8ur5:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5 (local refinement of TH-1heptad)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more